KBS LTER, GLBRC and LTAR Publications
Publications associated with KBS LTER, GLBRC and LTAR projects. Click on the pdf link to get open access papers or to sign-in (free and immediate) to get other papers. Click on the data link to get formally published datasets (other datasets available as noted within the publications). Other ways to view KBS LTER publications can be accessed by the Research | Publications menu above.
Publications are also available on our KBS LTER Google Scholar page
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Forthcoming Publications
Bahlai, C. A., W. vander Werf, M. O'Neal, L. Hemerik, and D. A. Landis. 2015. Shifts in dynamic regime of an invasive lady beetle are linked to the invasion and insecticidal management of its prey. Ecological Applications doi: 10.1890/14-2022.1 DOI: 10.1890/14-2022.1
(https://doi.org/10.1890/14-2022.1) -
2014
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2014
Deal M, Xu J, John R, Zenone T, Chen J, Jasrotia P, Kahmark K, Bossenbroek J, and M. C. 2014. Net primary production in three bioenergy crop systems following land conversion. Journal of Plant Ecology doi: 10.1093/jpe/rtt057 DOI: 10.1093/jpe/rtt057
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2014
Kim, S., B. E. Dale, and P. Keck. 2014. Energy Requirements and Greenhouse Gas Emissions of Maize Production in the USA. BioEnergy Research doi: 10.1007/s12155-013-9399-z DOI: 10.1007/s12155-013-9399-z
(https://doi.org/10.1007/s12155-013-9399-z) -
2014
Mandalika, A., L. Qin, T. K. Sato, and T. Runge. 2014. Integrated biorefinery model based on production of furans using open-ended high yield processes. Green Chemistry doi: 10.1039/c3gc42424c DOI: 10.1039/c3gc42424c
(https://doi.org/10.1039/c3gc42424c) -
2014
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2014
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2014
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2014
Tiemann, L. K. and S. Grandy. 2014. Mechanisms of soil carbon accrual and storage in bioenergy cropping systems. GCB Bioenergy doi: 10.1111/gcbb.12126 DOI: 10.1111/gcbb.12126
(https://doi.org/10.1111/gcbb.12126) -
2013
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2013
Howe, A. C., J. Jansson, S. A. Malfatti, S. G. Tringe, J. M. Tiedje, and C. T. Brown. 2013. Assembling large, complex environmental metagenomes. Nature Biotechnology (in press)
https://lter.kbs.msu.edu/pub/3215
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2016
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2015
Gelfand, I., M. Cui, J. Tang, and G. P. Robertson. 2015. Short-term drought response of N2O and CO2 emissions from mesic agricultural soils in the US Midwest. Agriculture, Ecosystems & Environment 212:127-133. DOI: 10.1016/j.agee.2015.07.005
(https://doi.org/10.1016/j.agee.2015.07.005) -
2014
Abraha, M., J. Chen, H. Chu, T. Zenone, R. John, Y. Su, S. K. Hamilton, and G. P. Robertson. 2014. Evapotranspiration of annual and perennial biofuel crops in a variable climate. GCB Bioenergy doi: 10.1111/gcbb.12239 DOI: 10.1111/gcbb.12239
(https://doi.org/10.1111/gcbb.12239) -
Alexander, H. M., K. E. Mauck, A. E. Whitfield, K. A. Garrett, and C. M. Malmstrom. 2014. Plant-virus interactions and the agro-ecological interface. 138:529-547. Springer Netherlands DOI: 10.1007/s10658-013-0317-1
(https://doi.org/10.1007/s10658-013-0317-1) -
Bennett, A. B. and R. Isaacs. 2014. Landscape composition influences pollinators and pollination services in perennail biofuel plantings. Agriculture Ecosystems & Environment 193:1-8. DOI: 10.1016/j.agee.2014.04.016
(https://doi.org/10.1016/j.agee.2014.04.016) -
Cole, J. R. and J. M. Tiedje. 2014. History and impact of RDP: A legacy from Carl Woese to microbiology. RNA Biology 11:239-243. DOI: 10.4161/rna.28306
(https://doi.org/10.4161/rna.28306) -
Gilmanov, T. G., J. M. Baker, C. J. Bernacchi, D. P. Billesbach, G. G. Burba, S. Castro, J. Chen, W. Eugster, M. L. Fischer, J. A. Gamon, M. T. Gebremedhin, A. J. Glenn, T. J. Griffis, J. L. Hatfield, M. W. Heuer, D. M. Howard, M. Y. Leclerc, H. W. Loescher, O. Marloie, T. P. Meyers, A. Olioso, R. L. Phillips, J. H. Prueger, R. H. Skinner, A. E. Suyker, M. Tenuta, and B. K. Wylie. 2014. Productivity and CO2 exchange of the leguminous crops: Estimates from flux tower measurements. Agronomy Journal 106:545-559. DOI: 10.2134/agronj2013.0270
(https://doi.org/10.2134/agronj2013.0270) -
Hedtcke, J. L., G. R. Sanford, K. E. Hadley, and K. D. Thelen. 2014. Maximizing land use during switchgrass establishment in the North Central United States.. Agronomy Journal 106:596-604. DOI: 10.2134/agronj2013.0410
(https://doi.org/10.2134/agronj2013.0410) -
Howe, A. C., J. JK, M. SA, T. SG, T. JM, and B. CT. 2014. Tackling soil diversity with the assembly of large complex metagenomes. PNAS 111:4904-4909. DOI: 10.1073/pnas.1402564111
(https://doi.org/10.1073/pnas.1402564111) -
Kells, B. J. and S. M. Swinton. 2014. Profitability of cellulosic biomass production in the northern Great Lakes Region. Agronomy Journal doi: 10.2134/agronj2013.0397 DOI: 10.2134/agronj2013.0397
(https://doi.org/10.2134/agronj2013.0397) -
Shcherbak, I. and G. P. Robertson. 2014. Determining the Diffusivity of Nitrous Oxide in Soil using In Situ Tracers. Soil Science Society of America Journal 78:79-88. DOI: 10.2136/sssaj2013.05.0181
(https://doi.org/10.2136/sssaj2013.05.0181) -
Syswerda, S. P. and G. P. Robertson. 2014. Ecosystem services along a management gradient in Michigan (USA) cropping systems. Agriculture Ecosystems & Environment doi: 10.1016/j.agee.2014.03.006 DOI: 10.1016/j.agee.2014.03.006
(https://doi.org/10.1016/j.agee.2014.03.006) -
Wieder, W. R., A. S. Grandy, C. M. Kallenbach, and G. B. Bonan. 2014. Integrating microbial physiology and physiochemical principles in soils with the MIcrobial-MIneral Carbon Stabilization (MIMICS) model . Biogeosciences Discussions 11:1147-1185. DOI: 10.5194/bgd-11-1147-2014
(https://doi.org/10.5194/bgd-11-1147-2014) -
2013
Asbjornsen, H., V. Hernandez-Santana, M. Liebman, J. Bayala, J. Chen, M. Helmers, C. K. Ong, and L. A. Schulte. 2013. Targeting perennial vegetation in agricultural landscapes for enhancing ecosystem services. Renewable Agriculture and Food Systems E-publication:1-25. DOI: 10.1017/S1742170512000385
(https://doi.org/10.1017/S1742170512000385) -
Bandaru, V., R. C. Izaurralde, K. Zhao, and M. Post. 2013. Soil carbon change and net energy associated with biofuel production on marginal lands: A regional modeling perspective. Journal of Environmental Quality 42:1802-1814. DOI: 10.2134/jeq2013.05.0171
(https://doi.org/10.2134/jeq2013.05.0171) -
Cleland, E. E., S. L. Collins, T. L. Dickson, E. C. Farrer, K. L. Gross, L. A. Gherardi, L. M. Hallett, R. J. Hobbs, J. S. Hsu, L. Turnbull, and K. N. Suding. 2013. Sensitivity of grassland plant community composition to spatial vs. temporal variation in precipitation. ESA: Ecology 94:1687-1696. DOI: 10.1890/12-1006.1
(https://doi.org/10.1890/12-1006.1) -
Duran, B. E. and C. J. Kucharik. 2013. Comparison of two chamber methods for measuring soil trace-gas fluxes in bioenergy cropping systems. Soil Science Society of America Journal 77:1601-1612. DOI: 10.2136/sssaj2013.01.0023
(https://doi.org/10.2136/sssaj2013.01.0023) -
Egbendewe-Mondzozo, A., S. M. Swinton, R. C. Izaurralde, D. H. Manowitz, and X. Zhang. 2013. Maintaining environmental quality while expanding biomass production: Sub-regional U.S. policy simulations. Energy Policy 57:518-531. DOI: 10.1016/j.enpol.2013.02.021
(https://doi.org/10.1016/j.enpol.2013.02.021) -
Egbendewe-Mondzozo, A., S. M. Swinton, B. D. Bals, and B. E. Dale. 2013. Can Dispersed Biomass Processing Protect the Environment and Cover the Bottom Line for Biofuel?. Environmental Science and Technology 47:1695-1703. DOI: 10.1021/es303829w
(https://doi.org/10.1021/es303829w) -
Eranki, P. L., D. H. Manowitz, B. D. Bals, R. C. Izaurralde, S. Kim, and B. E. Dale. 2013. The watershed-scale optimized and rearranged landscape design (WORLD) model and local biomass processing depots for sustainable biofuel production: Integrated life cycle assessments. Biofuels, Bioproducts and Biorefining 7:537-550. DOI: 10.1002/bbb.1426
(https://doi.org/10.1002/bbb.1426) -
Hoagland, K. C., M. D. Ruark, M. J. Renz, and R. D. Jackson. 2013. Agricultural management of switchgrass for fuel quality and thermal energy yield on highly erodible land in the driftless area of southwest Wisconsin. BioEnergy Research 6:1012-1021. DOI: 10.1007/s12155-013-9335-2
(https://doi.org/10.1007/s12155-013-9335-2) -
Jakubowski, A. R., M. D. Casler, and R. D. Jackson. 2013. Genetic evidence suggests a widespread distribution of native North American populations of reed canarygrass. Biological Invasions 15:261-268. DOI: 10.1007/s10530-012-0300-3
(https://doi.org/10.1007/s10530-012-0300-3) -
Jordan, N., L. A. Schulte, C. Williams, D. Pitt, C. S. Slotterback, R. Jackson, D. Landis, B. Dale, D. Becker, and M. Rickenbach. 2013. Landlabs: An integrated approach to creating agricultural enterprises that meet the triple botom line. Journal of Higher Education Outreach and Engagement 17:175-200.
https://lter.kbs.msu.edu/pub/3319 -
Kang, S., W. M. Post, D. Wang, J. Nichols, V. P. Bandaru, and T. West. 2013. Hierarchical marginal land assessment for land use planning. Land Use Policy 30:106-113. DOI: 10.1016/j.landusepol.2012.03.002
(https://doi.org/10.1016/j.landusepol.2012.03.002) -
Kang, S., W. M. Post, J. A. Nichols, D. Wang, T. O. West, V. Bandaru, and R. C. Izaurralde. 2013. Marginal lands: Concept, assessment and management. Journal of Agricultural Science 5:129-139. DOI: 10.5539/jas.v5n5p129
(https://doi.org/10.5539/jas.v5n5p129) -
King, J. S., R. Ceulemans, J. M. Albaugh, S. Y. Dillen, J. Domec, R. Fichot, M. Fischer, Z. Leggett, E. Sucre, M. Trnka, and T. Zenone. 2013. The challenge of lignocellulosic bioenergy in a water-limited world. BioScience 63:102-117. DOI: 10.1525/bio.2013.63.2
(https://doi.org/10.1525/bio.2013.63.2) -
Kraatz, S., J. C. Sinistore, and D. J. Reinemann. 2013. Energy intensity and global warming potential of corn grain ethanol production in Wisconsin (USA). Food and Energy Security doi: 10.1002/fes3.27 DOI: 10.1002/fes3.27
(https://doi.org/10.1002/fes3.27) -
Kucharik, C. J., A. VanLoocke, J. D. Lenters, and M. M. Motew. 2013. Miscanthus establishment and overwintering in the Midwest USA: A regional modeling study of crop residue management on critical minimum soil temperatures. PLoS One 8:e68847. DOI: 10.1371/journal.pone.0068847
(https://doi.org/10.1371/journal.pone.0068847) -
Lee, Z. M. and T. M. Schmidt. 2013. Bacterial growth efficiency varies in soils under different land management practices. Soil Biology and Biochemistry 69:282-290. DOI: 10.1016/j.soilbio.2013.11.012
(https://doi.org/10.1016/j.soilbio.2013.11.012) -
Meehan, T. D., C. Gratton, E. Diehl, N. D. Hunt, D. F. Mooney, S. J. Ventura, B. L. Barham, and R. D. Jackson. 2013. Ecosystem-service tradeoffs associated with switching from annual to perennial energy crops in riparian zones of the US Midwest. PloS one 11:e80093. DOI: 10.1371/journal.pone.0080093
(https://doi.org/10.1371/journal.pone.0080093) -
Meehan, T. D., J. Glassberg, and C. Gratton. 2013. Butterfly community structure and landscape composition in agricultural landscapes of the central United States. 17:411-419. DOI: 10.1007/s10841-012-9523-y
(https://doi.org/10.1007/s10841-012-9523-y) -
Palmer, M. M., J. A. Forrester, D. E. Rothstein, and D. J. Mladenoff. 2013. Conversion of open lands to short‐rotation woody biomass crops: site variability affects nitrogen cycling and N2O fluxes in the US Northern Lake States. GCB Bioenergy doi: 10.1111/gcbb.12069 DOI: 10.1111/gcbb.12069
(https://doi.org/10.1111/gcbb.12069) -
Ridley, C. E., H. I. Jager, C. M. Clark, R. A. Efroymson, C. Kwit, D. A. Landis, Z. H. Leggett, and D. A. Miller. 2013. Debate: Can bioenergy be produced in a sustainable manner that protects biodiversity and avoids the risk of invaders?. Bulletin of the Ecological Society of America 94:277-290. DOI: 10.1890/0012-9623-94.3.277
(https://doi.org/10.1890/0012-9623-94.3.277) -
Ruan, L. and G. P. Robertson. 2013. Initial nitrous oxide, carbon dioxide, and methane costs of converting conservation reserve program grassland to row crops under no-till vs. conventional tillage. Global Change Biology 19:2478-2489. DOI: 10.1111/gcb.12216
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Sanford, G. R. and C. J. Kucharik. 2013. Effect of methodological consideration on soil carbon parameter estimates obtained via the acid hydrolysis-incubation method. Soil Biology and Biochemistry 67:295-305. DOI: 10.1016/j.soilbio.2013.09.002
(https://doi.org/10.1016/j.soilbio.2013.09.002) -
Smith, S. L., K. D. Thelen, and S. J. MacDonald. 2013. Yield and quality analyses of bioenergy crops grown on a regulatory brownfield. Biomass and BioEnergy doi: 10.1016/j.biombioe.2012.12.017 DOI: 10.1016/j.biombioe.2012.12.017
(https://doi.org/10.1016/j.biombioe.2012.12.017) -
Williams, C. L., P. Charland, G. Radloff, D. Sample, and R. D. Jackson. 2013. Grass-shed: Place and process for catalyzing perennial grass bioeconomies and their potential multiple benefits. Journal of Soil and Water Conservation 68:141A-146A. DOI: 10.2489/jswc.68.6.141A
(https://doi.org/10.2489/jswc.68.6.141A) -
Zenone, T., I. Gelfand, J. Chen, S. K. Hamilton, and G. P. Robertson. 2013. From set-aside grassland to annual and perennial cellulosic biofuel crops: Effects of land use change on carbon balance. Agricultural and Forest Meteorology 182-183:1-12. DOI: 10.1016/j.agrformet.2013.07.015
(https://doi.org/10.1016/j.agrformet.2013.07.015) -
Zhang, X., R. C. Izaurralde, J. G. Arnold, and J. R. Williams. 2013. Modifying Soil Organic Matter-Residue Module in SWAT to Simulate Carbon Flux from Cropland: Model Development and Initial Evaluation. Science of the Total Environment 463-464:810-822. DOI: 10.1016/j.scitotenv.2013.06.056
(https://doi.org/10.1016/j.scitotenv.2013.06.056) -
Zhang, Y., Y. Sun, and J. R. Cole. 2013. A sensitive and accurate protein domain classification tool (SALT) for short reads. Bioinformatics 29:2103-2111. DOI: 10.1093/bioinformatics/btt357
(https://doi.org/10.1093/bioinformatics/btt357) -
Zhang, X., P. Beeson, R. Link, D. Manowitz, R. C. Izaurralde, A. Sadeghi, A. M. Thomson, R. Sahajpal, R. Srinivasan, and J. G. Arnold. 2013. Efficient multi-objective calibration of a computationally intensive hydrologic model with parallel computing software in Python. Environmental Modelling & Software 46:208-218. DOI: 10.1016/j.envsoft.2013.03.013
(https://doi.org/10.1016/j.envsoft.2013.03.013) -
2012
Backhaus, J. and D. Rothamer. 2012. Design methodology for volatility characteristics of bio-derived drop-in gasoline fuels. Spring Technical Meeting of the Central States Section of the Combustion Institute, Vol 1, Pages 222-234 Curran Associates, Inc Dayton, OH
https://lter.kbs.msu.edu/pub/3167 -
Bals, B. D. and B. E. Dale. 2012. Developing a model for assessing biomass processing technologies within a Local Biomass Processing Depot. 106:161-169. DOI: 10.1016/j.biortech.2011.12.024
(https://doi.org/10.1016/j.biortech.2011.12.024) -
Bals, B. D., F. Teymouri, J. Campbell, M. Jin, and B. E. Dale. 2012. Low temperature and long residence time AFEX pretreatment of corn stover.. BioEnergy Research 5:372-379. DOI: 10.1007/s12155-12011-19140-12158
(https://doi.org/10.1007/s12155-12011-19140-12158) -
Brown, C. T., A. Howe, Q. Zhang, A. B. Pyrkosz, and T. H. Brom. 2012. A reference-free algorithm for computational normalization of shotgun sequencing data. PLOS OnE (in press) doi: 10.1007/s12155-012-9258-3 DOI: 10.1007/s12155-012-9258-3
(https://doi.org/10.1007/s12155-012-9258-3) -
Grieshop, M. J., B. P. Werling, K. Buehrer, J. Perrone, R. Isaacs, and D. A. Landis. 2012. Big brother is watching: Studying insect predation in the age of digital surveillance. American Entomologist 58:130-192.
https://lter.kbs.msu.edu/pub/3170 -
Hao, X., K. D. Thelen, and J. Gao. 2012. Prediction of the ethanol yield of dry-grind maize grain using near infrared spectroscopy. Biosystems Engineering 112:161-170. DOI: 10.1016/j.biosystemseng.2012.03.007
(https://doi.org/10.1016/j.biosystemseng.2012.03.007) -
Izaurralde, R. C., W. B. McGill, and J. R. Williams. 2012. Development and application of the EPIC Model for carbon cycle, greenhouse gas mitigation, and biofuel studies. Managing Agricultural Greenhouse Gases: Coordinated Agricultural Research through GRACEnet to Address our Changing Climate, Vol Chapter 17, Pages 409-429 Academic Press DOI: 10.1016/B978-0-12-386897-8.00017-6
(https://doi.org/10.1016/B978-0-12-386897-8.00017-6) -
Kim, S., B. E. Dale, and R. G. Ong. 2012. An alternative approach to indirect land use change: Allocating greenhouse gas effects among different uses of land. Biomass and BioEnergy 46:447-452. DOI: 10.1016/j.biombioe.2012.07.015
(https://doi.org/10.1016/j.biombioe.2012.07.015) -
Knapp, A. K., M. D. Smith, S. E. Hobbie, S. L. Collins, T. J. Fahey, G. J. Hansen, D. A. Landis, K. J. Pierre, J. M. Melillo, T. R. Seastedt, G. R. Shaver, and J. R. Webster. 2012. Past, Present, and Future Roles of Long-Term Experiments in the LTER Network. Bioscience 62:377-389. DOI: 10.1525/bio.2012.62.4.9
(https://doi.org/10.1525/bio.2012.62.4.9) -
Landis, D. A., M. M. Gardiner, and J. Tompkins. 2012. Using Native Plant Species to Diversify Agriculture. Biodiversity and Insect Pests: Key Issues for Sustainable Management, Pages 276-292 John Wiley & Sons, Ltd DOI: 10.1002/9781118231838.ch17
(https://doi.org/10.1002/9781118231838.ch17) -
Liang, C., H. W. Read, and T. C. Balser. 2012. GC-based detection of aldononitrile acetate derivatized glucosamine and muramic acid for microbial residue determination in soil samples: Analytical protocol and derivative validation. Journal of Visualized Experiments doi: 10.3791/3767 DOI: 10.3791/3767
(https://doi.org/10.3791/3767) -
Liang, C., E. da C. Jesus, D. S. Duncan, R. D. Jackson, J. M. Tiedje, and T. C. Balser. 2012. Soil microbial communities under model biofuel cropping systems in southern Wisconsin, USA: Impact of crop species and soil properties. Applied Soil Ecology 54:24-31. DOI: 10.1016/j.apsoil.2011.11.015
(https://doi.org/10.1016/j.apsoil.2011.11.015) -
Liang, C., D. S. Duncan, T. C. Balser, J. M. Tiedje, and R. D. Jackson. 2012. Soil microbial residue storage linked to soil legacy under biofuel cropping systems in southern Wisconsin, USA. Soil Biology & Biochemistry 57:939-942. DOI: 10.1016/j.soilbio.2012.09.006
(https://doi.org/10.1016/j.soilbio.2012.09.006) -
Liang, C. and T. C. Balser. 2012. Warming and nitrogen deposition lessen microbial residue contribution to soil carbon pool. Nature Communications 3:1222. DOI: 10.1038/ncomms2224
(https://doi.org/10.1038/ncomms2224) -
Meehan, T. D., B. P. Werling, D. A. Landis, and C. Gratton. 2012. Pest-suppression potential of Midwestern landscapes under contrasting bioenergy scenarios. Public Libary of Science ONE 7:e41728. DOI: 10.1371/journal.pone.0041728.g001
(https://doi.org/10.1371/journal.pone.0041728.g001) -
Meehan, T. D. 2012. Energetics of thermoregulation by an industrious endotherm. American Journal of Human Biology 24:713-715. DOI: 10.1002/ajhb.22278
(https://doi.org/10.1002/ajhb.22278) -
Miao, R., D. A. Hennessy, and B. A. Babcock. 2012. Investment in Cellulosic Biofuel Refineries: Do Waivable Biofuel Mandates Matter?. American Journal of Agricultural Economics 9:750-762. DOI: 10.1093/ajae/aar142
(https://doi.org/10.1093/ajae/aar142) -
Miesel, J. R., M. J. Renz, J. E. Doll, and R. D. Jackson. 2012. Effectiveness of weed management methods in establishment of switchgrass and a native species mixture for biofuels in Wisconsin. Biomass & Bioenergy 36:121-131. DOI: 10.1016/j.biombioe.2011.10.018
(https://doi.org/10.1016/j.biombioe.2011.10.018) -
Nikièma, P., D. E. Rothstein, and R. O. Miller. 2012. Initial greenhouse gas emissions and nitrogen leaching losses associated with converting pastureland to short-rotation woody bioenergy crops in northern Michigan, USA. 39:413-426. DOI: 10.1016/j.biombioe.2012.01.037
(https://doi.org/10.1016/j.biombioe.2012.01.037) -
Pell, J., A. Hintze, R. Canino-Koning, A. Howe, J. M. Tiedje, and C. T. Brown. 2012. Scaling metagenome sequence assembly with probabilistic de Bruijn graphs. Proceedings of the National Academy of Sciences 109:13272-13277. DOI: 10.1073/pnas.1121464109
(https://doi.org/10.1073/pnas.1121464109) -
Robertson, B. A., C. Porter, D. A. Landis, and D. W. Schemske. 2012. Agroenergy crops influence diversity, biomass, and guild structure of terrestrial arthropod communities. 5:179-188. DOI: 10.1007/s12155-011-9161-3
(https://doi.org/10.1007/s12155-011-9161-3) -
Robertson, B. A., R. A. Rice, T. S. Sillet, B. A. Babcock, D. A. Landis, C. A. Ribic, J. R. Herkert, R. J. Fletcher, J. J. Fontaine, and D. J. Schemske. 2012. Are agrofuels a threat or opportunity for grassland birds in the United States?. The Condor 114:679-688. DOI: 10.1525/cond.2012.110136
(https://doi.org/10.1525/cond.2012.110136) -
Robertson, B. A., D. A. Landis, T. S. Sillett, E. R. Loomis, and R. A. Rice. 2012. Perennial agroenergy feedstocks as en route habitat for spring migratory birds. BioEnergy Research 6:311-320. DOI: 10.1007/s12155-012-9258-3
(https://doi.org/10.1007/s12155-012-9258-3) -
Robertson, G. P., T. W. Bruulsema, R. Gehl, D. Kanter, D. Mauzerall, A. Rotz, and C. Williams. 2012. Climate-nitrogen interactions in agriculture. Biogeochemistry doi: 10.1007/s10533-012-9802-4 DOI: 10.1007/s10533-012-9802-4
(https://doi.org/10.1007/s10533-012-9802-4) -
Rothamer, D. A. and J. H. Jennings. 2012. Study of the knocking propensity of 2,5-dimethylfuran–gasoline and ethanol–gasoline blends. Fuel 98:203-212. DOI: 10.1016/j.fuel.2012.03.049
(https://doi.org/10.1016/j.fuel.2012.03.049) -
Sanford, G. R., J. L. Posner, R. D. Jackson, C. J. Kucharik, J. L. Hedtcke, and T. Lin. 2012. Soil carbon lost from mollisols of the North Central U.S.A. with 20 years of agricultural best management practices. Agriculture, Ecosystems & Environment 162:68-76. DOI: 10.1016/j.agee.2012.08.011
(https://doi.org/10.1016/j.agee.2012.08.011) -
Sen, S. M., C. A. Henao, D. J. Braden, J. A. Dumesic, and C. T. Maravelias. 2012. Catalytic conversion of lignocellulosic biomass to fuels: Process development and technoeconomic evaluation. Chemical Engineering Science 67:57-67. DOI: 10.1016/j.ces.2011.07.022
(https://doi.org/10.1016/j.ces.2011.07.022) -
Sen, S. M., J. B. Binder, R. T. Raines, and C. T. Maravelias. 2012. Conversion of biomass to sugars via ionic liquid hydrolysis: process synthesis and economic evaluation. Biofuels, Bioproducts & Biorefining 6:444-452. DOI: 10.1002/bbb.1336
(https://doi.org/10.1002/bbb.1336) -
Surendran Nair, S., S. Kang, X. Zhang, F. E. Miguez, R. C. Izaurralde, W. M. Post, M. C. Dietze, L. R. Lynd, and S. D. Wullschleger. 2012. Bioenergy crop models: descriptions, data requirements, and future challenges. GCB Bioenergy 4:620-633. DOI: 10.1111/j.1757-1707.2012.01166.x
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2011
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Brown, C. T. and J. M. Tiedje. 2011. Metagenomics: the paths forward. Handbook of Molecular Microbial Ecology II: Metagenomics in Different Habitats Pages 581-588 Wiley-Blackwell
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Cole, J. R., Q. Wang, B. Chai, and J. M. Tiedje. 2011. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches Pages 313-324 Wiley-Blackwell
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Egbendewe-Mondzozo, A., S. M. Swinton, R. C. Izaurralde, D. H. Manowitz, and X. Zhang. 2011. Biomass supply from alternative cellulosic crops and crop residues: A spatially explicit bioeconomic modeling approach.. Biomass and Bioenergy 35:4636-4647. DOI: 10.1016/j.biombioe.2011.09.010
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Egbendewe-Mondzozo, A., S. M. Swinton, B. D. Bals, and B. E. Dale. 2011. Can dispersed biomass processing protect the environment and cover the bottom line for biofuel?. Staff Paper 2011-15, No. 2011-15. Michigan State University
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Eranki, P. L., B. D. Bals, and B. E. Dale. 2011. Advanced Regional Biomass Processing Depots: a key to the logistical challenges of the cellulosic biofuel industry. Biofuels, Bioproducts and Biorefining 5:621-630. DOI: 10.1002/bbb.318
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Eranki, P. L. and B. E. Dale. 2011. Comparative life cycle assessment of centralized and distributed biomass processing systems combined with mixed feedstock landscapes. Global Change Biology Bioenergy 3:427-438. DOI: 10.1111/j.1757-1707.2011.01096.x
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Fletcher Jr., R. J., B. A. Robertson, J. Evans, P. J. Doran, J. R. Alavalapati, and D. W. Schemske. 2011. Biodiversity conservation in the era of biofuels: risks and opportunities. Frontiers in Ecology and the Environment 9:161-168. DOI: 10.1890/090091
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Gao, J., L. Qian, K. K. Thelen, X. Hao, L. da Costa Sousa, V. Balan, and B. E. Dale. 2011. Corn Harvest Strategies for Combined Starch and Cellulosic Bioprocessing to Ethanol. Agronomy Journal 103:844-850. DOI: 10.2134/agronj2010.0445
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Hull, S., J. Arntzen, C. Bleser, A. Crossley, R. Jackson, E. Lobner, L. Paine, G. Radloff, C. Ribic, D. Sample, J. Vanderbrook, S. Ventura, S. Walling, J. Widholm, and C. Williams. 2011. Wisconsin sustainable planting and harvest guidelines for nonforest biomass. Report to the Wisconsin Bioenergy Council,
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Iwai, S., B. Chai, E. D. Jesus, C. R. Penton, T. K. Lee, J. R. Cole, and J. M. Tiedje. 2011. Gene-targeted-metagenomics (GT-metagenomics) to explore the extensive diversity of genes of interest in microbial communities. Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches Pages 235-244 Wiley/Blackwell Press
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Jakubowski, A. R., R. D. Jackson, R. C. Johnson, J. Hu, and M. D. Casler. 2011. Genetic diversity and population structure of Eurasian populations of reed canarygrass: cytotypes, cultivars, and interspecific hybrids. Crop and Pasture Science 62:982-991. DOI: 10.1071/CP11232
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Mallory, M. L., D. J. Hayes, and B. A. Babcock. 2011. Crop-based biofuel production with acreage competition and uncertainty. Land Economics 87:610-627.
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Malmstrom, C. M., U. Melcher, and N. A. Bosque-Pérez. 2011. The expanding field of plant virus ecology: Historical foundations, knowledge gaps, and research directions. Virus Research 159:84-94. DOI: 10.1016/j.virusres.2011.05.010
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Meyer, S., W. Thompson, and P. Westhoff. 2011. New challenges in agricultural modeling: relating energy and farm commodity prices. FAPRI-MU Report 05-11
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Morrice, J. 2011. Differences in drought sensitivity among prairie communities and among management histories: a remote sensing analysis of 221 prairies in the northern Great Plains. Master's Thesis Michigan State University
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Mukherjee, A. and J. Ané. 2011. Germinating Spore Exudates from Arbuscular Mycorrhizal Fungi: Molecular and Developmental Responses in Plants and Their Regulation by Ethylene. Molecular Plant - Microbe Interactions 24:260-270. DOI: 10.1094/MPMI-06-10-0146
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Muñoz, J. D. and A. Kravchenko. 2011. Soil carbon mapping using on-the-go near infrared spectroscopy, topography and aerial photographs. Geoderma 166:102-110. DOI: 10.1016/j.geoderma.2011.07.017
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Nichols, J., S. Kang, W. M. Post, D. Wang, B. , V, D. Manowitz, X. Zhang, and R. C. Izaurralde. 2011. HPC-EPIC for High Resolution Simulations of Environmental and Sustainability Assessment.. Computers and Electronics in Agriculture 79:112-115. DOI: 10.1016/j.compag.2011.08.012
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Peckham, S. D. and S. T. Gower. 2011. Simulated long-term effects of harvest and biomass residue removal on soil carbon and nitrogen content and productivity for two Upper Great Lakes forest ecosystems. Global Change Biology Bioenergy 3:135-147. DOI: 10.1111/j.1757-1707.2010.01067.x
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Phillippo, C. 2011. Effectiveness of summer mowing for weed control in plantings of native C4 prairie grasses. Master's Thesis Michigan State University
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Robertson, B. A., P. J. Doran, E. R. Loomis, J. R. Robertson, and D. W. Schemske. 2011. Avian Use of Perennial Biomass Feedstocks as Post-Breeding and Migratory Stopover Habitat. PLoS ONE 6:e16941. DOI: 10.1371/journal.pone.0016941
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Robertson, G. P., S. K. Hamilton, and W. J. Parton. 2011. The biogeochemistry of bioenergy landscapes: Carbon, nitrogen, and water considerations. Ecological Applications 21:1055-1067. DOI: 10.1890/09-0456.1
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Robertson, B. A., P. J. Doran, J. R. Robertson, E. R. Loomis, and D. W. Schemske. 2011. Perennial biomass feedstocks enhance avian diversity. Global Change Biology Bioenergy 3:235-246. DOI: 10.1111/j.1757-1707.2010.01080.x
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Schrotenboer, A. C., M. S. Allen, and C. M. Malmstrom. 2011. Modification of native grasses for biofuel production may increase virus susceptibility. Global Change Biology Bioenergy 3:360-374. DOI: 10.1111/j.1757-1707.2011.01093.x
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Schrotenboer, A. C. 2011. Prairie grasses for biofuels and ecological restoration: Modifications to native species and their place in human-modified landscapes. Doctoral Dissertation Michigan State University
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Song, F., J. Zhao, and S. M. Swinton. 2011. Switching to Perennial Energy Crops under Uncertainty and Costly Reversibility. American Journal of Agricultural Economics 93:768-783. DOI: 10.1093/ajae/aar018
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Sul, W. J., J. R. Cole, E. da C. Jesus, Q. Wang, R. J. Farris, J. A. Fish, and J. M. Tiedje. 2011. Bacterial community comparisons by taxonomy-supervised analysis independent of sequence alignment and clustering. PNAS 108:14637-14642. DOI: 10.1073/pnas.1111435108
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Thompson, W., S. Meyer, and J. Whistance. 2011. Model documentation for biomass, cellulosic biofuels, renewable and conventional electricity, natural gas and coal markets. FAPRI-MU Report 12-11
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Werling, B. P., T. D. Meehan, C. Gratton, and D. A. Landis. 2011. Influence of habitat and landscape perenniality on insect natural enemies in three candidate biofuel crops. Biological Control 59:304-312. DOI: 10.1016/j.biocontrol.2011.06.014
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Werling, B. P., T. D. Meehan, B. A. Robertson, C. Gratton, and D. A. Landis. 2011. Biocontrol potential varies with changes in biofuel–crop plant communities and landscape perenniality. Global Change Biology Bioenergy 3:347-359. DOI: 10.1111/j.1757-1707.2011.01092.x
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Xu, C., C. Liang, S. Wullschleger, C. Wilson, and N. McDowell. 2011. Importance of feedback loops between soil inorganic nitrogen and microbial communities in the heterotrophic soil respiration response to global warming. Nature Reviews Microbiology 9:222. DOI: 10.1038/nrmicro2439-c1
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Zenone, T., J. Chen, M. W. Deal, B. Wilske, P. Jasrotia, J. Xu, A. K. Bhardwaj, S. K. Hamilton, and G. P. Robertson. 2011. CO <sub>2</sub> fluxes of transitional bioenergy crops: effect of land conversion during the first year of cultivation. Global Change Biology-Bioenergy 3:401-412. DOI: 10.1111/j.1757-1707.2011.01098.x
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Zhang, X., F. Liang, and B. Yu. 2011. Explicitly Integrating Parameter, Input, and Structure Uncertainties into Bayesian Neural Networks for Probabilistic Hydrologic Forecasting. Journal of Hydrology 409:696-709. DOI: 10.1016/j.jhydrol.2011.09.002
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Zhang, X., R. C. Izaurralde, J. G. Arnold, N. B. Sammons, D. H. Manowitz, A. M. Thomson, and J. R. Williams. 2011. Comment on “Modeling Miscanthus in the Soil and Water Assessment Tool (SWAT) to Simulate Its Water Quality Effects As a Bioenergy Crop”. Environmental Science & Technology 45:6211-6212. DOI: 10.1021/es201463x
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2010
Dale, V. H., R. Lowrance, P. J. Mulholland, and G. P. Robertson. 2010. Bioenergy sustainability at the regional scale. Ecology and Society 15:23.
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Dale, B. E., B. D. Bals, S. Kim, and P. Eranki. 2010. Biofuels Done Right: Land Efficient Animal Feeds Enable Large Environmental and Energy Benefits. Environmental Science and Technology 44:8385-8389. DOI: 10.1021/es101864b
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Egbendewe-Mondzozo, A., S. M. Swinton, R. C. Izaurralde, and D. H. Manowitz. 2010. Biomass supply from alternative cellulosic crops and crop residues: a preliminary spatial bioeconomic modeling approach. Staff Paper No. 2010-07, Michigan State University
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FAPRI-MU 2010. FAPRI U.S. Baseline Briefing Book: Missouri Insert. FAPRI-MU Report #02-10. Food and Agricultural Policy Research Institute Columbia, MO
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Feng, H. and B. A. Babcock. 2010. Impacts of ethanol on planted acreage in market equilibrium. American Journal of Agricultural Economics 92:789-802.
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Feng, H., O. D. Rubin, and B. A. Babcock. 2010. Greenhouse gas impacts of ethanol from Iowa corn: Life cycle assessment versus wide approach. Biomass and Bioenergy 34:912-921. DOI: 10.1016/j.biombioe.2010.01.037
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Gao, J., K. D. Thelen, D. H. Min, S. Smith, X. Hao, and R. Gehl. 2010. Effects of manure and fertilizer applications on canola oil content and fatty acid composition. Journal of Environmental Quality 102:790-797.
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Gardiner, M. A., J. K. Tuell, R. Isaacs, J. Gibbs, J. S. Ascher, and D. A. Landis. 2010. Implications of three biofuel crops for beneficial arthropods in agricultural landscapes. Bioenergy Research 3:6-19. DOI: 10.1007/s12155-009-9065-7
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Gelfand, I., S. S. Snapp, and G. P. Robertson. 2010. Energy efficiency of conventional, organic, and alternative cropping systems for food and fuel production at a site in the US Midwest. Environmental Science and Technology 44:4006-4011. DOI: 10.1021/es903385g
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Gregg, J. S. and R. C. Izaurralde. 2010. Effect of crop residue harvest on long-term crop yield, soil erosion and nutrient balance: trade-offs for a sustainable bioenergy feedstock. Biofuels 1:69-83. DOI: 10.4155/bfs.09.8
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Hao, X., K. D. Thelen, and J. Gao. 2010. Effects of soil and topographic properties on spatial variability of corn grain ethanol yield. Agronomy Journal 102:998-1006.
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Hao, X., K. D. Thelen, and J. Gao. 2010. Earlier-maturing hybrids improve corn grain profitability in the northern Corn Belt. Crop Management E-publication. DOI: 10.1094/cm-20101203-01-rs
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Horvath, G., M. Blaho, Á. Egri, G. Kriska, I. Seres, and B. Robertson. 2010. Reducing the maladaptive attractiveness of solar panels to polarotactic insects. Conservation Biology 24:1644-1653. DOI: 10.1111/j.1523-1739.2010.01518.x
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Jakubowski, A. R., M. D. Casler, and R. D. Jackson. 2010. The benefits of harvesting wetland invaders for cellulosic biofuel: an ecosystem services perspective. Restoration Ecology 18:789-795.
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James, L. K., S. M. Swinton, and K. D. Thelen. 2010. Profitability Analysis of Cellulosic Energy Crops Compared with Corn . Agronomy Journal 102:675-687.
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Jesus, E. C., E. Susilawati, S. L. Smith, Q. Wang, B. Chai, R. J. Farris, J. L. Rodrigues, K. D. Thelen, and J. M. Tiedje. 2010. Bacterial communities in the rhizosphere of biofuel crops grown on marginal lands as evaluated by 16S rRNA gene pyrosequences . BioEnergy Research 3:20-27. DOI: 10.1007/s12155-009-9073-7
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Kaufman, A. S., P. J. Meier, J. C. Sinistore, and D. J. Reinemann. 2010. Applying life-cycle assessment to low carbon fuel standards- How allocation choices influence carbon intensity for renewable transportation fuels. Energy Policy 38:5229-5241.
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Landis, D. A. and B. P. Werling. 2010. Arthropods and biofuel production systems in North America. Insect Science 17:220-236. DOI: 10.1111/j.1744-7917.2009.01310.x
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Liang, C. and T. C. Balsar. 2010. Microbial production of recalcitrant organic matter in global soils: implications for productivity and climate policy. Nature Reviews - Microbiology 9.
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Liang, C. and T. C. Balser. 2010. Mass spectrometric characterization of amino sugar aldononitrile acetate derivatives used for isotope enrichment assessment of microbial residues. Soil Biology & Biochemistry 42:904-909. DOI: 10.1016/j.soilbio.2010.02.006
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McSwiney, C. P., S. Bohm, P. R. Grace, and G. P. Robertson. 2010. Greenhouse gas emissions calculator for grain and biofuel farming systems. Journal of Natural Resources and Life Sciences Education 39:125-131. DOI: 10.4195/jnrlse.2009.0021
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Meehan, T. D., A. H. Hurlbert, and C. Gratton. 2010. Bird communities in future bioenergy landscapes of the Upper Midwest. PNAS 107:18533-18538. DOI: 10.1073/pnas.1008475107
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Mukherjee, A. and J. M. Ané. 2010. Germinating spore exudates from arbuscular mycorrhizal fungi: 1 molecular and developmental responses in plants and their regulation by ethylene . Molecular Plant-Microbe Interactions 24:260-270. DOI: 10.1094/MPMI-06-10-0146
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Robertson, G. P., S. K. Hamilton, S. J. Del Grosso, and W. J. Parton. 2010. Growing plants for fuel: predicting effects on water, soil, and the atmosphere. Biofuels and Sustainability Reports: Ecological Society of America
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Song, F. 2010. Essays on land use decisions for eneryg crop production and the effects of subsidies under uncertainty and costly reversibility. Dissertation Michigan State University East Lansing, MI
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Srinivasan, R., X. Zhang, and J. Arnold. 2010. SWAT ungauged: Hydrological budget and crop yield predictions in the Upper Mississippi River Basin. . Transactions of the ASABE 53:1533-1546.
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Thelen, K. D., B. Fronning, S. A. Kravchenko, and G. P. Robertson. 2010. Integrating livestock manure with a corn–soybean bioenergy cropping system improves short-term carbon sequestration rates and net global warming potential. Biomass and BioEnergy 34:960-966. DOI: 10.1016/j.biombioe.2010.02.004
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Webster, C. R., D. J. Flaspohler, R. D. Jackson, T. D. Meehan, and C. Gratton. 2010. Diversity, productivity and landscape-level effects in North American grasslands managed for biomass production. Biofuels 1:451-461. DOI: 10.4155/BFS.10.18
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